Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.07■□□□□ 0.64
RARAP10276 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.07■□□□□ 0.64
RARAP10276 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RARAP10276 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.07■□□□□ 0.64
RARAP10276 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.07■□□□□ 0.64
RARAP10276 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RARAP10276 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.07■□□□□ 0.64
RARAP10276 NEK4P2-201ENST00000580004 1012 ntBASIC19.07■□□□□ 0.64
RARAP10276 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.07■□□□□ 0.64
RARAP10276 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RARAP10276 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.07■□□□□ 0.64
RARAP10276 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.07■□□□□ 0.64
RARAP10276 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.07■□□□□ 0.64
RARAP10276 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RARAP10276 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
RARAP10276 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RARAP10276 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.06■□□□□ 0.64
RARAP10276 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RARAP10276 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.06■□□□□ 0.64
RARAP10276 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RARAP10276 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.06■□□□□ 0.64
RARAP10276 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.06■□□□□ 0.64
RARAP10276 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.06■□□□□ 0.64
RARAP10276 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.06■□□□□ 0.64
RARAP10276 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.06■□□□□ 0.64
RARAP10276 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.06■□□□□ 0.64
RARAP10276 AL138966.2-201ENST00000621997 464 ntBASIC19.06■□□□□ 0.64
RARAP10276 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RARAP10276 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RARAP10276 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
RARAP10276 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RARAP10276 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RARAP10276 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 LINC01126-201ENST00000623515 1646 ntBASIC19.06■□□□□ 0.64
RARAP10276 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RARAP10276 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RARAP10276 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.05■□□□□ 0.64
RARAP10276 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.05■□□□□ 0.64
RARAP10276 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RARAP10276 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 SLC25A3P1-201ENST00000443844 931 ntBASIC19.05■□□□□ 0.64
RARAP10276 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.05■□□□□ 0.64
RARAP10276 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 AC009065.1-201ENST00000564055 1225 ntBASIC19.05■□□□□ 0.64
RARAP10276 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.05■□□□□ 0.64
RARAP10276 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 AC141257.4-201ENST00000634557 245 ntBASIC19.05■□□□□ 0.64
RARAP10276 AC136944.6-201ENST00000634818 245 ntBASIC19.05■□□□□ 0.64
RARAP10276 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
RARAP10276 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.05■□□□□ 0.64
RARAP10276 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RARAP10276 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARAP10276 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RARAP10276 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RARAP10276 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RARAP10276 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.04■□□□□ 0.64
RARAP10276 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RARAP10276 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARAP10276 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.04■□□□□ 0.64
RARAP10276 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms