Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RETP07949 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RETP07949 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.29■□□□□ 0.52
RETP07949 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RETP07949 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 AC141586.3-201ENST00000562166 1838 ntBASIC18.29■□□□□ 0.52
RETP07949 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.29■□□□□ 0.52
RETP07949 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.29■□□□□ 0.52
RETP07949 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.29■□□□□ 0.52
RETP07949 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.29■□□□□ 0.52
RETP07949 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.29■□□□□ 0.52
RETP07949 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.29■□□□□ 0.52
RETP07949 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RETP07949 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RETP07949 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RETP07949 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RETP07949 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.28■□□□□ 0.52
RETP07949 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RETP07949 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.28■□□□□ 0.52
RETP07949 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.28■□□□□ 0.52
RETP07949 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.28■□□□□ 0.52
RETP07949 AC006333.2-201ENST00000607957 2099 ntBASIC18.28■□□□□ 0.52
RETP07949 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.28■□□□□ 0.52
RETP07949 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.28■□□□□ 0.52
RETP07949 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.28■□□□□ 0.52
RETP07949 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.28■□□□□ 0.52
RETP07949 FAM197Y3-203ENST00000618346 717 ntBASIC18.28■□□□□ 0.52
RETP07949 AL355877.3-201ENST00000622820 899 ntBASIC18.28■□□□□ 0.52
RETP07949 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.28■□□□□ 0.52
RETP07949 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.28■□□□□ 0.52
RETP07949 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 SDHAP1-207ENST00000440850 2000 ntBASIC18.28■□□□□ 0.52
RETP07949 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RETP07949 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RETP07949 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RETP07949 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RETP07949 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RETP07949 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RETP07949 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.27■□□□□ 0.52
RETP07949 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RETP07949 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RETP07949 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RETP07949 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.27■□□□□ 0.52
RETP07949 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RETP07949 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.27■□□□□ 0.52
RETP07949 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RETP07949 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
RETP07949 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RETP07949 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.27■□□□□ 0.52
RETP07949 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RETP07949 AC096582.2-201ENST00000510860 516 ntBASIC18.27■□□□□ 0.52
RETP07949 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.27■□□□□ 0.52
RETP07949 AC145285.3-201ENST00000564603 959 ntBASIC18.27■□□□□ 0.52
RETP07949 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
RETP07949 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RETP07949 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RETP07949 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.27■□□□□ 0.52
RETP07949 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RETP07949 RCC2P3-201ENST00000418112 1537 ntBASIC18.27■□□□□ 0.51
RETP07949 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RETP07949 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RETP07949 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms