Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 KRT8P47-201ENST00000604727 1398 ntBASIC23.78■■□□□ 1.4
COL5A2P05997 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.78■■□□□ 1.4
COL5A2P05997 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A2P05997 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A2P05997 SLC4A1APP2-201ENST00000424054 1259 ntBASIC23.78■■□□□ 1.4
COL5A2P05997 PON3-203ENST00000427422 894 ntTSL 3 BASIC23.78■■□□□ 1.4
COL5A2P05997 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC23.78■■□□□ 1.4
COL5A2P05997 COX5A-202ENST00000562233 441 ntTSL 3 BASIC23.78■■□□□ 1.4
COL5A2P05997 AC018845.2-201ENST00000568326 409 ntBASIC23.78■■□□□ 1.4
COL5A2P05997 AC027612.4-201ENST00000605371 583 ntBASIC23.78■■□□□ 1.4
COL5A2P05997 AL513190.1-201ENST00000621254 727 ntBASIC23.78■■□□□ 1.4
COL5A2P05997 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.78■■□□□ 1.4
COL5A2P05997 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A2P05997 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
COL5A2P05997 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A2P05997 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.78■■□□□ 1.4
COL5A2P05997 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A2P05997 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A2P05997 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A2P05997 MED29-202ENST00000594368 1471 ntTSL 2 BASIC23.78■■□□□ 1.4
COL5A2P05997 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.77■■□□□ 1.4
COL5A2P05997 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A2P05997 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A2P05997 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC23.77■■□□□ 1.4
COL5A2P05997 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.77■■□□□ 1.4
COL5A2P05997 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
COL5A2P05997 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.77■■□□□ 1.4
COL5A2P05997 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
COL5A2P05997 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A2P05997 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC23.77■■□□□ 1.4
COL5A2P05997 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A2P05997 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A2P05997 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A2P05997 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A2P05997 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A2P05997 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC23.77■■□□□ 1.4
COL5A2P05997 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC23.77■■□□□ 1.4
COL5A2P05997 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.77■■□□□ 1.4
COL5A2P05997 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
COL5A2P05997 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
COL5A2P05997 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
COL5A2P05997 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A2P05997 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
COL5A2P05997 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A2P05997 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A2P05997 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A2P05997 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC23.76■■□□□ 1.39
COL5A2P05997 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
COL5A2P05997 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A2P05997 AL078644.1-201ENST00000609881 752 ntBASIC23.76■■□□□ 1.39
COL5A2P05997 AC004706.3-202ENST00000621574 984 ntBASIC23.76■■□□□ 1.39
COL5A2P05997 C20orf181-201ENST00000623918 480 ntBASIC23.76■■□□□ 1.39
COL5A2P05997 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A2P05997 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A2P05997 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A2P05997 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A2P05997 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC23.76■■□□□ 1.39
COL5A2P05997 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A2P05997 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.76■■□□□ 1.39
COL5A2P05997 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.76■■□□□ 1.39
COL5A2P05997 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.76■■□□□ 1.39
COL5A2P05997 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A2P05997 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
COL5A2P05997 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 CNN2P11-201ENST00000429351 262 ntBASIC23.75■■□□□ 1.39
COL5A2P05997 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
COL5A2P05997 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC23.75■■□□□ 1.39
COL5A2P05997 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC23.75■■□□□ 1.39
COL5A2P05997 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC23.75■■□□□ 1.39
COL5A2P05997 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC23.75■■□□□ 1.39
COL5A2P05997 SNHG9-202ENST00000564014 471 ntBASIC23.75■■□□□ 1.39
COL5A2P05997 AL589182.2-201ENST00000619332 1049 ntBASIC23.75■■□□□ 1.39
COL5A2P05997 ORC5-208ENST00000626700 344 ntTSL 3 BASIC23.75■■□□□ 1.39
COL5A2P05997 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
COL5A2P05997 AC005082.1-201ENST00000413042 2259 ntBASIC23.75■■□□□ 1.39
COL5A2P05997 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC23.75■■□□□ 1.39
COL5A2P05997 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A2P05997 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
COL5A2P05997 HCG4B-203ENST00000450128 991 ntBASIC23.75■■□□□ 1.39
COL5A2P05997 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC23.75■■□□□ 1.39
COL5A2P05997 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.75■■□□□ 1.39
COL5A2P05997 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC23.75■■□□□ 1.39
COL5A2P05997 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC23.75■■□□□ 1.39
COL5A2P05997 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
COL5A2P05997 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL5A2P05997 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL5A2P05997 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.74■■□□□ 1.39
COL5A2P05997 AC006504.4-201ENST00000592118 1568 ntBASIC23.74■■□□□ 1.39
COL5A2P05997 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms