Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DRAP01903 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 NOC2LP1-202ENST00000452600 2235 ntBASIC19.52■□□□□ 0.72
HLA-DRAP01903 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DRAP01903 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DRAP01903 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DRAP01903 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 AL645929.1-201ENST00000420084 975 ntBASIC19.52■□□□□ 0.72
HLA-DRAP01903 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DRAP01903 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 AL136038.3-201ENST00000561909 1096 ntBASIC19.52■□□□□ 0.72
HLA-DRAP01903 AC087388.1-201ENST00000571370 1112 ntBASIC19.52■□□□□ 0.72
HLA-DRAP01903 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 AL121956.5-201ENST00000625261 221 ntBASIC19.52■□□□□ 0.72
HLA-DRAP01903 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DRAP01903 AC138028.4-201ENST00000564984 1845 ntBASIC19.52■□□□□ 0.72
HLA-DRAP01903 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DRAP01903 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DRAP01903 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
HLA-DRAP01903 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DRAP01903 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.51■□□□□ 0.71
HLA-DRAP01903 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DRAP01903 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
HLA-DRAP01903 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 AP000997.3-201ENST00000623333 2250 ntBASIC19.5■□□□□ 0.71
HLA-DRAP01903 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 FAM86EP-206ENST00000510506 987 ntBASIC19.5■□□□□ 0.71
HLA-DRAP01903 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 AC005332.3-201ENST00000589904 676 ntBASIC19.5■□□□□ 0.71
HLA-DRAP01903 GPR32P1-201ENST00000601788 811 ntBASIC19.5■□□□□ 0.71
HLA-DRAP01903 AL445228.2-201ENST00000605589 952 ntBASIC19.5■□□□□ 0.71
HLA-DRAP01903 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 FLJ13224-201ENST00000313737 1514 ntBASIC19.5■□□□□ 0.71
HLA-DRAP01903 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DRAP01903 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DRAP01903 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
HLA-DRAP01903 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DRAP01903 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DRAP01903 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms