Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RAPGEF3O95398 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC27.06■■□□□ 1.92
RAPGEF3O95398 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
RAPGEF3O95398 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC27.06■■□□□ 1.92
RAPGEF3O95398 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
RAPGEF3O95398 COPE-202ENST00000349893 948 ntTSL 2 BASIC27.06■■□□□ 1.92
RAPGEF3O95398 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RAPGEF3O95398 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RAPGEF3O95398 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC27.06■■□□□ 1.92
RAPGEF3O95398 AC015922.1-201ENST00000421102 1152 ntBASIC27.06■■□□□ 1.92
RAPGEF3O95398 FAM58CP-201ENST00000435741 640 ntBASIC27.06■■□□□ 1.92
RAPGEF3O95398 ARTN-206ENST00000472435 402 ntTSL 3 BASIC27.06■■□□□ 1.92
RAPGEF3O95398 CCDC74BP1-201ENST00000508880 1123 ntBASIC27.06■■□□□ 1.92
RAPGEF3O95398 AL390955.2-201ENST00000603032 514 ntBASIC27.06■■□□□ 1.92
RAPGEF3O95398 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
RAPGEF3O95398 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RAPGEF3O95398 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RAPGEF3O95398 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RAPGEF3O95398 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RAPGEF3O95398 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
RAPGEF3O95398 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RAPGEF3O95398 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC27.05■■□□□ 1.92
RAPGEF3O95398 AC190387.1-201ENST00000551683 408 ntBASIC27.05■■□□□ 1.92
RAPGEF3O95398 CYB561-217ENST00000582997 877 ntTSL 5 BASIC27.05■■□□□ 1.92
RAPGEF3O95398 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC27.05■■□□□ 1.92
RAPGEF3O95398 AC010507.1-201ENST00000633895 436 ntBASIC27.05■■□□□ 1.92
RAPGEF3O95398 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
RAPGEF3O95398 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RAPGEF3O95398 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
RAPGEF3O95398 MYLKP1-201ENST00000509077 1580 ntBASIC27.05■■□□□ 1.92
RAPGEF3O95398 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RAPGEF3O95398 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 AC004461.1-201ENST00000412461 403 ntBASIC27.04■■□□□ 1.92
RAPGEF3O95398 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 RPS15P9-201ENST00000494093 319 ntBASIC27.04■■□□□ 1.92
RAPGEF3O95398 KRT19P2-202ENST00000557173 1012 ntBASIC27.04■■□□□ 1.92
RAPGEF3O95398 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
RAPGEF3O95398 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 AC010460.3-201ENST00000511359 1579 ntBASIC27.04■■□□□ 1.92
RAPGEF3O95398 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC27.04■■□□□ 1.92
RAPGEF3O95398 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RAPGEF3O95398 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RAPGEF3O95398 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RAPGEF3O95398 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
RAPGEF3O95398 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RAPGEF3O95398 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RAPGEF3O95398 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
RAPGEF3O95398 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
RAPGEF3O95398 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RAPGEF3O95398 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RAPGEF3O95398 HLA-DRB6-201ENST00000411500 1235 ntBASIC27.03■■□□□ 1.92
RAPGEF3O95398 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC27.03■■□□□ 1.92
RAPGEF3O95398 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RAPGEF3O95398 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC27.03■■□□□ 1.92
RAPGEF3O95398 AC069262.1-201ENST00000539058 672 ntBASIC27.03■■□□□ 1.92
RAPGEF3O95398 DUT-210ENST00000559935 569 ntTSL 3 BASIC27.03■■□□□ 1.92
RAPGEF3O95398 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC27.03■■□□□ 1.92
RAPGEF3O95398 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RAPGEF3O95398 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC27.03■■□□□ 1.92
RAPGEF3O95398 KRT8P47-201ENST00000604727 1398 ntBASIC27.03■■□□□ 1.92
RAPGEF3O95398 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC27.02■■□□□ 1.92
RAPGEF3O95398 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC27.02■■□□□ 1.92
RAPGEF3O95398 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC27.02■■□□□ 1.92
RAPGEF3O95398 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC27.02■■□□□ 1.92
RAPGEF3O95398 AC004835.2-201ENST00000603762 682 ntBASIC27.02■■□□□ 1.92
RAPGEF3O95398 AQP6-205ENST00000618286 829 ntTSL 5 BASIC27.02■■□□□ 1.92
RAPGEF3O95398 Z92544.3-201ENST00000624747 417 ntBASIC27.02■■□□□ 1.92
RAPGEF3O95398 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC27.02■■□□□ 1.92
RAPGEF3O95398 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC27.02■■□□□ 1.92
RAPGEF3O95398 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAPGEF3O95398 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RAPGEF3O95398 BCAR1-209ENST00000546196 1340 ntBASIC27.01■■□□□ 1.91
RAPGEF3O95398 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RAPGEF3O95398 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RAPGEF3O95398 CBR1-202ENST00000399191 838 ntTSL 3 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 GSAP-205ENST00000430584 600 ntTSL 5 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 POLD4-207ENST00000531239 584 ntTSL 2 BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms