Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.77■□□□□ 0.44
SIX3O95343 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIX3O95343 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX3O95343 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX3O95343 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SIX3O95343 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.77■□□□□ 0.43
SIX3O95343 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SIX3O95343 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX3O95343 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX3O95343 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX3O95343 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX3O95343 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SIX3O95343 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 BCL2-203ENST00000589955 5011 ntBASIC17.76■□□□□ 0.43
SIX3O95343 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SIX3O95343 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SIX3O95343 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
SIX3O95343 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SIX3O95343 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 AC009947.2-201ENST00000444014 672 ntBASIC17.76■□□□□ 0.43
SIX3O95343 SEC1P-202ENST00000473944 940 ntBASIC17.76■□□□□ 0.43
SIX3O95343 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.76■□□□□ 0.43
SIX3O95343 AC024243.1-201ENST00000609234 778 ntBASIC17.76■□□□□ 0.43
SIX3O95343 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SIX3O95343 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.76■□□□□ 0.43
SIX3O95343 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX3O95343 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SIX3O95343 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SIX3O95343 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX3O95343 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
SIX3O95343 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX3O95343 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SIX3O95343 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX3O95343 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX3O95343 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SIX3O95343 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.75■□□□□ 0.43
SIX3O95343 ECEL1P2-202ENST00000465689 757 ntBASIC17.75■□□□□ 0.43
SIX3O95343 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SIX3O95343 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX3O95343 NAPSB-206ENST00000562112 1266 ntBASIC17.75■□□□□ 0.43
SIX3O95343 AC009065.1-201ENST00000564055 1225 ntBASIC17.75■□□□□ 0.43
SIX3O95343 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SIX3O95343 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.75■□□□□ 0.43
SIX3O95343 MIR3180-4-201ENST00000582223 153 ntBASIC17.75■□□□□ 0.43
SIX3O95343 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX3O95343 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX3O95343 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX3O95343 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX3O95343 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX3O95343 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX3O95343 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SIX3O95343 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX3O95343 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX3O95343 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX3O95343 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms