Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.13■□□□□ 0.49
NDUFS3O75489 AC211429.1-201ENST00000415277 523 ntBASIC18.13■□□□□ 0.49
NDUFS3O75489 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.13■□□□□ 0.49
NDUFS3O75489 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.13■□□□□ 0.49
NDUFS3O75489 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.13■□□□□ 0.49
NDUFS3O75489 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NDUFS3O75489 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.13■□□□□ 0.49
NDUFS3O75489 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
NDUFS3O75489 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NDUFS3O75489 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
NDUFS3O75489 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS3O75489 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.12■□□□□ 0.49
NDUFS3O75489 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
NDUFS3O75489 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.12■□□□□ 0.49
NDUFS3O75489 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 TERF1P1-201ENST00000311003 1181 ntBASIC18.12■□□□□ 0.49
NDUFS3O75489 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NDUFS3O75489 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.12■□□□□ 0.49
NDUFS3O75489 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
NDUFS3O75489 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
NDUFS3O75489 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NDUFS3O75489 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.12■□□□□ 0.49
NDUFS3O75489 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS3O75489 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.12■□□□□ 0.49
NDUFS3O75489 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
NDUFS3O75489 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS3O75489 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
NDUFS3O75489 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NDUFS3O75489 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.11■□□□□ 0.49
NDUFS3O75489 BX664615.1-201ENST00000443558 458 ntBASIC18.11■□□□□ 0.49
NDUFS3O75489 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.11■□□□□ 0.49
NDUFS3O75489 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.11■□□□□ 0.49
NDUFS3O75489 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS3O75489 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NDUFS3O75489 LINC01023-201ENST00000606054 436 ntBASIC18.11■□□□□ 0.49
NDUFS3O75489 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NDUFS3O75489 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NDUFS3O75489 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NDUFS3O75489 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS3O75489 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS3O75489 FLJ13224-201ENST00000313737 1514 ntBASIC18.11■□□□□ 0.49
NDUFS3O75489 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS3O75489 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS3O75489 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NDUFS3O75489 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS3O75489 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS3O75489 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFS3O75489 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NDUFS3O75489 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NDUFS3O75489 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFS3O75489 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NDUFS3O75489 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFS3O75489 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFS3O75489 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NDUFS3O75489 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFS3O75489 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFS3O75489 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFS3O75489 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFS3O75489 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFS3O75489 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NDUFS3O75489 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms