Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPHN1O60890 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPHN1O60890 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.97■□□□□ 0.63
OPHN1O60890 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPHN1O60890 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
OPHN1O60890 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPHN1O60890 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
OPHN1O60890 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPHN1O60890 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPHN1O60890 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
OPHN1O60890 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
OPHN1O60890 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.97■□□□□ 0.63
OPHN1O60890 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPHN1O60890 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.96■□□□□ 0.63
OPHN1O60890 AC034236.2-201ENST00000606662 1610 ntBASIC18.96■□□□□ 0.63
OPHN1O60890 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.96■□□□□ 0.63
OPHN1O60890 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.96■□□□□ 0.63
OPHN1O60890 ABALON-201ENST00000629058 1903 ntBASIC18.96■□□□□ 0.63
OPHN1O60890 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
OPHN1O60890 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.96■□□□□ 0.63
OPHN1O60890 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.96■□□□□ 0.63
OPHN1O60890 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.96■□□□□ 0.63
OPHN1O60890 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.96■□□□□ 0.63
OPHN1O60890 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
OPHN1O60890 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
OPHN1O60890 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPHN1O60890 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
OPHN1O60890 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
OPHN1O60890 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.95■□□□□ 0.62
OPHN1O60890 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
OPHN1O60890 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.95■□□□□ 0.62
OPHN1O60890 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
OPHN1O60890 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.95■□□□□ 0.62
OPHN1O60890 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
OPHN1O60890 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.95■□□□□ 0.62
OPHN1O60890 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.95■□□□□ 0.62
OPHN1O60890 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.95■□□□□ 0.62
OPHN1O60890 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.95■□□□□ 0.62
OPHN1O60890 MIR4674-201ENST00000582457 87 ntBASIC18.95■□□□□ 0.62
OPHN1O60890 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.95■□□□□ 0.62
OPHN1O60890 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.95■□□□□ 0.62
OPHN1O60890 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
OPHN1O60890 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
OPHN1O60890 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.95■□□□□ 0.62
OPHN1O60890 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
OPHN1O60890 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.95■□□□□ 0.62
OPHN1O60890 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.95■□□□□ 0.62
OPHN1O60890 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPHN1O60890 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.94■□□□□ 0.62
OPHN1O60890 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
OPHN1O60890 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
OPHN1O60890 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
OPHN1O60890 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.94■□□□□ 0.62
OPHN1O60890 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.94■□□□□ 0.62
OPHN1O60890 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.94■□□□□ 0.62
OPHN1O60890 KRT18P38-201ENST00000449496 1282 ntBASIC18.94■□□□□ 0.62
OPHN1O60890 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
OPHN1O60890 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.94■□□□□ 0.62
OPHN1O60890 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.94■□□□□ 0.62
OPHN1O60890 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.94■□□□□ 0.62
OPHN1O60890 AP003041.3-201ENST00000527151 707 ntBASIC18.94■□□□□ 0.62
OPHN1O60890 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.94■□□□□ 0.62
OPHN1O60890 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
OPHN1O60890 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.94■□□□□ 0.62
OPHN1O60890 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.94■□□□□ 0.62
OPHN1O60890 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms