Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
EDF1O60869 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
EDF1O60869 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
EDF1O60869 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
EDF1O60869 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.88■□□□□ 0.45
EDF1O60869 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.88■□□□□ 0.45
EDF1O60869 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.88■□□□□ 0.45
EDF1O60869 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.88■□□□□ 0.45
EDF1O60869 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.88■□□□□ 0.45
EDF1O60869 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
EDF1O60869 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.88■□□□□ 0.45
EDF1O60869 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.88■□□□□ 0.45
EDF1O60869 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EDF1O60869 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.88■□□□□ 0.45
EDF1O60869 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.87■□□□□ 0.45
EDF1O60869 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.87■□□□□ 0.45
EDF1O60869 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.87■□□□□ 0.45
EDF1O60869 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.87■□□□□ 0.45
EDF1O60869 MIR149-201ENST00000384879 89 ntBASIC17.87■□□□□ 0.45
EDF1O60869 TSPY6P-201ENST00000448518 926 ntBASIC17.87■□□□□ 0.45
EDF1O60869 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.87■□□□□ 0.45
EDF1O60869 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.87■□□□□ 0.45
EDF1O60869 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.87■□□□□ 0.45
EDF1O60869 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.87■□□□□ 0.45
EDF1O60869 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.87■□□□□ 0.45
EDF1O60869 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 AL163051.1-201ENST00000569214 1512 ntBASIC17.87■□□□□ 0.45
EDF1O60869 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EDF1O60869 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.87■□□□□ 0.45
EDF1O60869 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.86■□□□□ 0.45
EDF1O60869 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.86■□□□□ 0.45
EDF1O60869 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
EDF1O60869 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
EDF1O60869 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
EDF1O60869 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.86■□□□□ 0.45
EDF1O60869 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.86■□□□□ 0.45
EDF1O60869 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
EDF1O60869 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 PCDHB19P-201ENST00000570871 2371 ntBASIC17.86■□□□□ 0.45
EDF1O60869 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.86■□□□□ 0.45
EDF1O60869 AC004951.3-201ENST00000418645 1148 ntBASIC17.86■□□□□ 0.45
EDF1O60869 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.86■□□□□ 0.45
EDF1O60869 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
EDF1O60869 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
EDF1O60869 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.86■□□□□ 0.45
EDF1O60869 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.86■□□□□ 0.45
EDF1O60869 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
EDF1O60869 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
EDF1O60869 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
EDF1O60869 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.86■□□□□ 0.45
EDF1O60869 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.86■□□□□ 0.45
EDF1O60869 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EDF1O60869 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.86■□□□□ 0.45
EDF1O60869 AC046158.3-201ENST00000624947 2558 ntBASIC17.86■□□□□ 0.45
EDF1O60869 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EDF1O60869 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
EDF1O60869 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms