Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 PKD1P1-201ENST00000458669 6805 ntBASIC17.51■□□□□ 0.39
SLC28A2O43868 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC28A2O43868 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC28A2O43868 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC28A2O43868 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC28A2O43868 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC28A2O43868 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC28A2O43868 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC28A2O43868 SPDYE13P-201ENST00000445314 798 ntBASIC17.51■□□□□ 0.39
SLC28A2O43868 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC28A2O43868 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.51■□□□□ 0.39
SLC28A2O43868 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 MIR3180-1-201ENST00000580374 94 ntBASIC17.51■□□□□ 0.39
SLC28A2O43868 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC28A2O43868 MIR3180-3-201ENST00000584616 94 ntBASIC17.51■□□□□ 0.39
SLC28A2O43868 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC28A2O43868 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC28A2O43868 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC28A2O43868 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC28A2O43868 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC28A2O43868 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A2O43868 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC28A2O43868 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC28A2O43868 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 KRT8P3-201ENST00000519669 1449 ntBASIC17.5■□□□□ 0.39
SLC28A2O43868 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC28A2O43868 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC28A2O43868 AC092183.1-201ENST00000469884 875 ntBASIC17.5■□□□□ 0.39
SLC28A2O43868 AC091304.2-201ENST00000564639 760 ntBASIC17.5■□□□□ 0.39
SLC28A2O43868 NEK4P2-201ENST00000580004 1012 ntBASIC17.5■□□□□ 0.39
SLC28A2O43868 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC28A2O43868 SLC25A6P4-201ENST00000586535 553 ntBASIC17.5■□□□□ 0.39
SLC28A2O43868 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC28A2O43868 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 AC068587.9-201ENST00000641814 219 ntBASIC17.5■□□□□ 0.39
SLC28A2O43868 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC28A2O43868 MTMR9LP-203ENST00000426597 1545 ntBASIC17.5■□□□□ 0.39
SLC28A2O43868 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC28A2O43868 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC28A2O43868 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC28A2O43868 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC28A2O43868 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC28A2O43868 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SLC28A2O43868 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SLC28A2O43868 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A2O43868 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC28A2O43868 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC28A2O43868 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLC28A2O43868 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.49■□□□□ 0.39
SLC28A2O43868 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC28A2O43868 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SLC28A2O43868 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC28A2O43868 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 MIR1233-2-201ENST00000408138 82 ntBASIC17.49■□□□□ 0.39
SLC28A2O43868 MIR1233-1-201ENST00000408722 82 ntBASIC17.49■□□□□ 0.39
SLC28A2O43868 PMS2P1-201ENST00000431037 1228 ntBASIC17.49■□□□□ 0.39
SLC28A2O43868 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC28A2O43868 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SLC28A2O43868 AP002414.4-201ENST00000589764 1148 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms