Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ITM2AO43736 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ITM2AO43736 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ITM2AO43736 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ITM2AO43736 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ITM2AO43736 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.83■□□□□ 0.44
ITM2AO43736 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ITM2AO43736 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ITM2AO43736 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.83■□□□□ 0.44
ITM2AO43736 LINC00602-201ENST00000629776 2065 ntBASIC17.83■□□□□ 0.44
ITM2AO43736 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.82■□□□□ 0.44
ITM2AO43736 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.82■□□□□ 0.44
ITM2AO43736 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.82■□□□□ 0.44
ITM2AO43736 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.82■□□□□ 0.44
ITM2AO43736 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ITM2AO43736 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ITM2AO43736 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.82■□□□□ 0.44
ITM2AO43736 MFAP1P1-201ENST00000442257 1255 ntBASIC17.82■□□□□ 0.44
ITM2AO43736 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.82■□□□□ 0.44
ITM2AO43736 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.82■□□□□ 0.44
ITM2AO43736 RARRES2P10-201ENST00000564312 460 ntBASIC17.82■□□□□ 0.44
ITM2AO43736 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ITM2AO43736 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.82■□□□□ 0.44
ITM2AO43736 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.82■□□□□ 0.44
ITM2AO43736 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.82■□□□□ 0.44
ITM2AO43736 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.82■□□□□ 0.44
ITM2AO43736 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.82■□□□□ 0.44
ITM2AO43736 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ITM2AO43736 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.81■□□□□ 0.44
ITM2AO43736 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.81■□□□□ 0.44
ITM2AO43736 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.81■□□□□ 0.44
ITM2AO43736 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 FAM197Y1-201ENST00000421178 764 ntBASIC17.81■□□□□ 0.44
ITM2AO43736 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.81■□□□□ 0.44
ITM2AO43736 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 AC128676.1-201ENST00000454392 318 ntBASIC17.81■□□□□ 0.44
ITM2AO43736 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.81■□□□□ 0.44
ITM2AO43736 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ITM2AO43736 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.81■□□□□ 0.44
ITM2AO43736 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.81■□□□□ 0.44
ITM2AO43736 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ITM2AO43736 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ITM2AO43736 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.8■□□□□ 0.44
ITM2AO43736 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITM2AO43736 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITM2AO43736 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
ITM2AO43736 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITM2AO43736 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITM2AO43736 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.8■□□□□ 0.44
ITM2AO43736 RPPH1-201ENST00000516869 333 ntBASIC17.8■□□□□ 0.44
ITM2AO43736 SLC25A1P4-201ENST00000567977 778 ntBASIC17.8■□□□□ 0.44
ITM2AO43736 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.8■□□□□ 0.44
ITM2AO43736 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.8■□□□□ 0.44
ITM2AO43736 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITM2AO43736 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ITM2AO43736 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITM2AO43736 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.8■□□□□ 0.44
ITM2AO43736 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.8■□□□□ 0.44
ITM2AO43736 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ITM2AO43736 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ITM2AO43736 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITM2AO43736 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ITM2AO43736 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
ITM2AO43736 NKILA-202ENST00000614771 2598 ntBASIC17.8■□□□□ 0.44
ITM2AO43736 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ITM2AO43736 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ITM2AO43736 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.79■□□□□ 0.44
ITM2AO43736 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ITM2AO43736 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITM2AO43736 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms