Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.6■□□□□ 0.73
TNRC18O15417 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.6■□□□□ 0.73
TNRC18O15417 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.6■□□□□ 0.73
TNRC18O15417 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
TNRC18O15417 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.59■□□□□ 0.73
TNRC18O15417 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.59■□□□□ 0.73
TNRC18O15417 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TNRC18O15417 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 MTCL1P1-201ENST00000446207 792 ntBASIC19.59■□□□□ 0.73
TNRC18O15417 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.59■□□□□ 0.73
TNRC18O15417 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TNRC18O15417 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 ELK2AP-201ENST00000392510 1007 ntBASIC19.59■□□□□ 0.73
TNRC18O15417 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.59■□□□□ 0.73
TNRC18O15417 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.59■□□□□ 0.73
TNRC18O15417 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.59■□□□□ 0.73
TNRC18O15417 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TNRC18O15417 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.58■□□□□ 0.73
TNRC18O15417 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNRC18O15417 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.58■□□□□ 0.73
TNRC18O15417 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.58■□□□□ 0.73
TNRC18O15417 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.58■□□□□ 0.73
TNRC18O15417 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TNRC18O15417 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.58■□□□□ 0.72
TNRC18O15417 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
TNRC18O15417 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNRC18O15417 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.58■□□□□ 0.72
TNRC18O15417 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.58■□□□□ 0.72
TNRC18O15417 MIR6727-201ENST00000620702 65 ntBASIC19.58■□□□□ 0.72
TNRC18O15417 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNRC18O15417 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNRC18O15417 KRT8P44-201ENST00000441609 1350 ntBASIC19.58■□□□□ 0.72
TNRC18O15417 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.57■□□□□ 0.72
TNRC18O15417 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TNRC18O15417 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.57■□□□□ 0.72
TNRC18O15417 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.57■□□□□ 0.72
TNRC18O15417 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.57■□□□□ 0.72
TNRC18O15417 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.57■□□□□ 0.72
TNRC18O15417 AC023141.13-201ENST00000604991 943 ntBASIC19.57■□□□□ 0.72
TNRC18O15417 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNRC18O15417 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.57■□□□□ 0.72
TNRC18O15417 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.57■□□□□ 0.72
TNRC18O15417 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNRC18O15417 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TNRC18O15417 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
TNRC18O15417 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.57■□□□□ 0.72
TNRC18O15417 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.57■□□□□ 0.72
TNRC18O15417 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.57■□□□□ 0.72
TNRC18O15417 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNRC18O15417 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.57■□□□□ 0.72
TNRC18O15417 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.57■□□□□ 0.72
TNRC18O15417 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.57■□□□□ 0.72
TNRC18O15417 AL158211.3-201ENST00000607385 239 ntBASIC19.57■□□□□ 0.72
TNRC18O15417 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNRC18O15417 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNRC18O15417 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.57■□□□□ 0.72
TNRC18O15417 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNRC18O15417 AC112492.5-201ENST00000421897 457 ntBASIC19.56■□□□□ 0.72
TNRC18O15417 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.56■□□□□ 0.72
TNRC18O15417 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.56■□□□□ 0.72
TNRC18O15417 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
TNRC18O15417 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TNRC18O15417 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.56■□□□□ 0.72
TNRC18O15417 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.56■□□□□ 0.72
TNRC18O15417 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TNRC18O15417 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.56■□□□□ 0.72
TNRC18O15417 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.56■□□□□ 0.72
TNRC18O15417 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNRC18O15417 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
TNRC18O15417 KRT8P47-201ENST00000604727 1398 ntBASIC19.56■□□□□ 0.72
TNRC18O15417 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TNRC18O15417 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.56■□□□□ 0.72
TNRC18O15417 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.56■□□□□ 0.72
TNRC18O15417 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.56■□□□□ 0.72
TNRC18O15417 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.56■□□□□ 0.72
TNRC18O15417 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.55■□□□□ 0.72
TNRC18O15417 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.55■□□□□ 0.72
TNRC18O15417 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNRC18O15417 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.55■□□□□ 0.72
TNRC18O15417 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.55■□□□□ 0.72
TNRC18O15417 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNRC18O15417 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNRC18O15417 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.55■□□□□ 0.72
TNRC18O15417 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.55■□□□□ 0.72
TNRC18O15417 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.55■□□□□ 0.72
TNRC18O15417 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TNRC18O15417 AC132938.2-201ENST00000579188 680 ntBASIC19.55■□□□□ 0.72
TNRC18O15417 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNRC18O15417 AL591163.1-201ENST00000641757 987 ntBASIC19.55■□□□□ 0.72
TNRC18O15417 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms