Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 KRASP1-201ENST00000407852 552 ntBASIC12.45□□□□□ -0.42
NDUFA1O15239 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.45□□□□□ -0.42
NDUFA1O15239 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.45□□□□□ -0.42
NDUFA1O15239 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.45□□□□□ -0.42
NDUFA1O15239 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.45□□□□□ -0.42
NDUFA1O15239 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.45□□□□□ -0.42
NDUFA1O15239 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.45□□□□□ -0.42
NDUFA1O15239 MTDHP1-201ENST00000605323 784 ntBASIC12.45□□□□□ -0.42
NDUFA1O15239 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NDUFA1O15239 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NDUFA1O15239 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.45□□□□□ -0.42
NDUFA1O15239 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NDUFA1O15239 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.45□□□□□ -0.42
NDUFA1O15239 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.45□□□□□ -0.42
NDUFA1O15239 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.45□□□□□ -0.42
NDUFA1O15239 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
NDUFA1O15239 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.45□□□□□ -0.42
NDUFA1O15239 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
NDUFA1O15239 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NDUFA1O15239 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NDUFA1O15239 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NDUFA1O15239 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFA1O15239 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFA1O15239 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFA1O15239 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NDUFA1O15239 PP12613-201ENST00000424958 2230 ntBASIC12.44□□□□□ -0.42
NDUFA1O15239 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFA1O15239 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NDUFA1O15239 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFA1O15239 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.44□□□□□ -0.42
NDUFA1O15239 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.44□□□□□ -0.42
NDUFA1O15239 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 AC008403.3-201ENST00000598924 454 ntBASIC12.44□□□□□ -0.42
NDUFA1O15239 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.44□□□□□ -0.42
NDUFA1O15239 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.44□□□□□ -0.42
NDUFA1O15239 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 AC131212.4-201ENST00000623606 975 ntBASIC12.44□□□□□ -0.42
NDUFA1O15239 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFA1O15239 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFA1O15239 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NDUFA1O15239 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFA1O15239 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
NDUFA1O15239 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.44□□□□□ -0.42
NDUFA1O15239 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NDUFA1O15239 AL357033.4-201ENST00000617703 1807 ntBASIC12.44□□□□□ -0.42
NDUFA1O15239 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.44□□□□□ -0.42
NDUFA1O15239 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NDUFA1O15239 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 AC006116.8-202ENST00000587620 1550 ntBASIC12.43□□□□□ -0.42
NDUFA1O15239 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
NDUFA1O15239 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFA1O15239 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFA1O15239 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFA1O15239 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NDUFA1O15239 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFA1O15239 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.43□□□□□ -0.42
NDUFA1O15239 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFA1O15239 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms