Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TO15178 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TO15178 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TO15178 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TO15178 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TO15178 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TO15178 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.71■□□□□ 0.27
TO15178 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.71■□□□□ 0.27
TO15178 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.71■□□□□ 0.27
TO15178 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.71■□□□□ 0.27
TO15178 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TO15178 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.71■□□□□ 0.27
TO15178 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TO15178 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.71■□□□□ 0.27
TO15178 PCED1CP-201ENST00000419887 785 ntBASIC16.71■□□□□ 0.27
TO15178 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.71■□□□□ 0.27
TO15178 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.71■□□□□ 0.27
TO15178 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.71■□□□□ 0.27
TO15178 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.71■□□□□ 0.27
TO15178 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TO15178 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 AC132938.6-201ENST00000623828 1655 ntBASIC16.71■□□□□ 0.27
TO15178 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.71■□□□□ 0.27
TO15178 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TO15178 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TO15178 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TO15178 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TO15178 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TO15178 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 Z83836.1-201ENST00000624605 1642 ntBASIC16.7■□□□□ 0.26
TO15178 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.7■□□□□ 0.26
TO15178 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TO15178 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TO15178 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TO15178 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.7■□□□□ 0.26
TO15178 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TO15178 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.7■□□□□ 0.26
TO15178 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.7■□□□□ 0.26
TO15178 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 KRT18P65-201ENST00000439811 1286 ntBASIC16.7■□□□□ 0.26
TO15178 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.7■□□□□ 0.26
TO15178 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TO15178 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.7■□□□□ 0.26
TO15178 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.7■□□□□ 0.26
TO15178 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.7■□□□□ 0.26
TO15178 AP000550.4-202ENST00000639755 178 ntBASIC16.7■□□□□ 0.26
TO15178 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.7■□□□□ 0.26
TO15178 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.7■□□□□ 0.26
TO15178 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.7■□□□□ 0.26
TO15178 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.7■□□□□ 0.26
TO15178 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.7■□□□□ 0.26
TO15178 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.7■□□□□ 0.26
TO15178 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TO15178 LINC00602-201ENST00000629776 2065 ntBASIC16.69■□□□□ 0.26
TO15178 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.69■□□□□ 0.26
TO15178 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.69■□□□□ 0.26
TO15178 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 IER3-202ENST00000376377 1350 ntBASIC16.69■□□□□ 0.26
TO15178 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.69■□□□□ 0.26
TO15178 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.69■□□□□ 0.26
TO15178 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TO15178 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TO15178 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.69■□□□□ 0.26
TO15178 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.69■□□□□ 0.26
TO15178 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms