Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHDO14521 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.55■□□□□ 0.4
SDHDO14521 AC022211.2-201ENST00000585075 2527 ntBASIC17.55■□□□□ 0.4
SDHDO14521 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
SDHDO14521 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHDO14521 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHDO14521 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHDO14521 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.55■□□□□ 0.4
SDHDO14521 KRT8P7-201ENST00000533003 1432 ntBASIC17.55■□□□□ 0.4
SDHDO14521 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHDO14521 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHDO14521 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.54■□□□□ 0.4
SDHDO14521 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SDHDO14521 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 LINC00602-201ENST00000629776 2065 ntBASIC17.54■□□□□ 0.4
SDHDO14521 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.54■□□□□ 0.4
SDHDO14521 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SDHDO14521 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.54■□□□□ 0.4
SDHDO14521 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.54■□□□□ 0.4
SDHDO14521 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SDHDO14521 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.54■□□□□ 0.4
SDHDO14521 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.54■□□□□ 0.4
SDHDO14521 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SDHDO14521 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SDHDO14521 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.54■□□□□ 0.4
SDHDO14521 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.53■□□□□ 0.4
SDHDO14521 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SDHDO14521 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.53■□□□□ 0.4
SDHDO14521 BCL2-203ENST00000589955 5011 ntBASIC17.53■□□□□ 0.4
SDHDO14521 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.53■□□□□ 0.4
SDHDO14521 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.53■□□□□ 0.4
SDHDO14521 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SDHDO14521 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SDHDO14521 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SDHDO14521 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.53■□□□□ 0.4
SDHDO14521 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.53■□□□□ 0.4
SDHDO14521 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
SDHDO14521 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.53■□□□□ 0.4
SDHDO14521 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.53■□□□□ 0.4
SDHDO14521 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SDHDO14521 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SDHDO14521 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SDHDO14521 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SDHDO14521 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.52■□□□□ 0.4
SDHDO14521 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SDHDO14521 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.52■□□□□ 0.4
SDHDO14521 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
SDHDO14521 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SDHDO14521 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SDHDO14521 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SDHDO14521 AC100803.2-201ENST00000562459 1963 ntBASIC17.52■□□□□ 0.4
SDHDO14521 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SDHDO14521 CRYGFP-201ENST00000418459 633 ntBASIC17.52■□□□□ 0.4
SDHDO14521 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.52■□□□□ 0.4
SDHDO14521 DUTP2-201ENST00000519164 463 ntBASIC17.52■□□□□ 0.4
SDHDO14521 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.52■□□□□ 0.4
SDHDO14521 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.52■□□□□ 0.4
SDHDO14521 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
SDHDO14521 CR769767.2-201ENST00000622735 460 ntBASIC17.52■□□□□ 0.4
SDHDO14521 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SDHDO14521 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SDHDO14521 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
SDHDO14521 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.52■□□□□ 0.39
SDHDO14521 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.52■□□□□ 0.39
SDHDO14521 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.52■□□□□ 0.39
SDHDO14521 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SDHDO14521 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SDHDO14521 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SDHDO14521 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SDHDO14521 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.52■□□□□ 0.39
SDHDO14521 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SDHDO14521 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms