Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.84■□□□□ 0.45
CDC7O00311 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.84■□□□□ 0.45
CDC7O00311 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
CDC7O00311 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CDC7O00311 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.84■□□□□ 0.45
CDC7O00311 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
CDC7O00311 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.83■□□□□ 0.45
CDC7O00311 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.83■□□□□ 0.45
CDC7O00311 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC7O00311 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.83■□□□□ 0.45
CDC7O00311 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC7O00311 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC7O00311 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC7O00311 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CDC7O00311 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CDC7O00311 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC7O00311 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDC7O00311 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDC7O00311 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CDC7O00311 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CDC7O00311 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.83■□□□□ 0.44
CDC7O00311 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 GCSHP2-201ENST00000560971 527 ntBASIC17.83■□□□□ 0.44
CDC7O00311 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.83■□□□□ 0.44
CDC7O00311 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.83■□□□□ 0.44
CDC7O00311 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.83■□□□□ 0.44
CDC7O00311 AL023973.1-201ENST00000624619 620 ntBASIC17.83■□□□□ 0.44
CDC7O00311 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CDC7O00311 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CDC7O00311 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.83■□□□□ 0.44
CDC7O00311 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.83■□□□□ 0.44
CDC7O00311 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDC7O00311 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.83■□□□□ 0.44
CDC7O00311 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDC7O00311 HTR7P1-202ENST00000624664 4411 ntBASIC17.82■□□□□ 0.44
CDC7O00311 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDC7O00311 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDC7O00311 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.82■□□□□ 0.44
CDC7O00311 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CDC7O00311 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CDC7O00311 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.82■□□□□ 0.44
CDC7O00311 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDC7O00311 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.82■□□□□ 0.44
CDC7O00311 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.82■□□□□ 0.44
CDC7O00311 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.82■□□□□ 0.44
CDC7O00311 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.82■□□□□ 0.44
CDC7O00311 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.82■□□□□ 0.44
CDC7O00311 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDC7O00311 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CDC7O00311 AC133561.5-201ENST00000635547 218 ntBASIC17.82■□□□□ 0.44
CDC7O00311 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDC7O00311 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 AC012317.2-201ENST00000623305 2251 ntBASIC17.82■□□□□ 0.44
CDC7O00311 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDC7O00311 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.82■□□□□ 0.44
CDC7O00311 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.82■□□□□ 0.44
CDC7O00311 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDC7O00311 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC7O00311 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC7O00311 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.81■□□□□ 0.44
CDC7O00311 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDC7O00311 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC7O00311 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDC7O00311 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.81■□□□□ 0.44
CDC7O00311 AC132938.6-201ENST00000623828 1655 ntBASIC17.81■□□□□ 0.44
CDC7O00311 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.81■□□□□ 0.44
CDC7O00311 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC7O00311 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CDC7O00311 FZD10-202ENST00000539839 3282 ntBASIC17.81■□□□□ 0.44
CDC7O00311 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDC7O00311 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.81■□□□□ 0.44
CDC7O00311 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CDC7O00311 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.81■□□□□ 0.44
CDC7O00311 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.81■□□□□ 0.44
CDC7O00311 AP000523.1-201ENST00000398242 1049 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms