Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
TAF4O00268 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 HTR5BP-201ENST00000430851 1154 ntBASIC17.78■□□□□ 0.44
TAF4O00268 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TAF4O00268 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.78■□□□□ 0.44
TAF4O00268 RPL13AP23-201ENST00000480739 586 ntBASIC17.78■□□□□ 0.44
TAF4O00268 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TAF4O00268 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TAF4O00268 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.78■□□□□ 0.44
TAF4O00268 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.78■□□□□ 0.44
TAF4O00268 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.78■□□□□ 0.44
TAF4O00268 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TAF4O00268 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.78■□□□□ 0.44
TAF4O00268 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.78■□□□□ 0.44
TAF4O00268 AL157888.1-201ENST00000631930 593 ntBASIC17.78■□□□□ 0.44
TAF4O00268 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.78■□□□□ 0.44
TAF4O00268 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.78■□□□□ 0.44
TAF4O00268 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.78■□□□□ 0.44
TAF4O00268 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TAF4O00268 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TAF4O00268 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TAF4O00268 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TAF4O00268 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TAF4O00268 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TAF4O00268 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.77■□□□□ 0.44
TAF4O00268 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.77■□□□□ 0.44
TAF4O00268 AP000997.3-201ENST00000623333 2250 ntBASIC17.77■□□□□ 0.44
TAF4O00268 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TAF4O00268 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.77■□□□□ 0.44
TAF4O00268 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.77■□□□□ 0.44
TAF4O00268 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
TAF4O00268 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TAF4O00268 NOC2LP1-202ENST00000452600 2235 ntBASIC17.77■□□□□ 0.44
TAF4O00268 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TAF4O00268 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TAF4O00268 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TAF4O00268 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
TAF4O00268 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TAF4O00268 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TAF4O00268 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.77■□□□□ 0.43
TAF4O00268 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TAF4O00268 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TAF4O00268 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TAF4O00268 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.77■□□□□ 0.43
TAF4O00268 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TAF4O00268 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.76■□□□□ 0.43
TAF4O00268 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.76■□□□□ 0.43
TAF4O00268 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.76■□□□□ 0.43
TAF4O00268 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
TAF4O00268 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.76■□□□□ 0.43
TAF4O00268 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.76■□□□□ 0.43
TAF4O00268 SEC1P-202ENST00000473944 940 ntBASIC17.76■□□□□ 0.43
TAF4O00268 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 AP001160.2-201ENST00000596071 487 ntBASIC17.76■□□□□ 0.43
TAF4O00268 AL390719.2-201ENST00000606993 987 ntBASIC17.76■□□□□ 0.43
TAF4O00268 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.76■□□□□ 0.43
TAF4O00268 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.76■□□□□ 0.43
TAF4O00268 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TAF4O00268 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TAF4O00268 Z83836.1-201ENST00000624605 1642 ntBASIC17.76■□□□□ 0.43
TAF4O00268 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TAF4O00268 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.75■□□□□ 0.43
TAF4O00268 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TAF4O00268 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TAF4O00268 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TAF4O00268 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms