Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01548A6NM66 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01548A6NM66 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 AP002383.4-201ENST00000442518 975 ntBASIC14.32□□□□□ -0.12
LINC01548A6NM66 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 AL121672.3-201ENST00000608644 468 ntBASIC14.32□□□□□ -0.12
LINC01548A6NM66 AC069148.1-201ENST00000608741 768 ntBASIC14.32□□□□□ -0.12
LINC01548A6NM66 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01548A6NM66 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01548A6NM66 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 AL096828.2-201ENST00000567259 1965 ntBASIC14.31□□□□□ -0.12
LINC01548A6NM66 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 AC132938.6-201ENST00000623828 1655 ntBASIC14.31□□□□□ -0.12
LINC01548A6NM66 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 TSSC2-201ENST00000450217 709 ntBASIC14.31□□□□□ -0.12
LINC01548A6NM66 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.31□□□□□ -0.12
LINC01548A6NM66 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01548A6NM66 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01548A6NM66 REXO1L9P-201ENST00000604264 2108 ntBASIC14.3□□□□□ -0.12
LINC01548A6NM66 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 AC113404.2-201ENST00000507884 177 ntBASIC14.3□□□□□ -0.12
LINC01548A6NM66 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 AC092119.3-201ENST00000612618 583 ntBASIC14.3□□□□□ -0.12
LINC01548A6NM66 NPAP1P7-201ENST00000613027 823 ntBASIC14.3□□□□□ -0.12
LINC01548A6NM66 IGHV3-41-201ENST00000613121 348 ntBASIC14.3□□□□□ -0.12
LINC01548A6NM66 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.3□□□□□ -0.12
LINC01548A6NM66 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01548A6NM66 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01548A6NM66 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms