Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 AC092597.1-201ENST00000487352 616 ntBASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHB11Q9Y5F2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 SPDYE13P-201ENST00000445314 798 ntBASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB11Q9Y5F2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 AC126763.1-201ENST00000552015 2118 ntBASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 AC073592.3-201ENST00000625118 1834 ntBASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 MIR149-201ENST00000384879 89 ntBASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 FAAHP1-202ENST00000446499 1238 ntBASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 BCL2-203ENST00000589955 5011 ntBASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB11Q9Y5F2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms