Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL161938.1-201ENST00000569833 2180 ntBASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 AC093484.2-201ENST00000580996 2166 ntBASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 AL022326.1-202ENST00000641533 845 ntBASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 AC079776.2-201ENST00000641154 1609 ntBASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.85■■□□□ 1.25
RTCBQ9Y3I0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 AC007952.6-201ENST00000573168 2673 ntBASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 AC003957.1-201ENST00000625108 2673 ntBASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 KRT18P27-201ENST00000427733 1299 ntBASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 AP006288.1-201ENST00000446065 395 ntBASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 AC005593.1-201ENST00000624894 515 ntBASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 PGM5P2-202ENST00000637225 1043 ntBASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.84■■□□□ 1.25
RTCBQ9Y3I0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.83■■□□□ 1.25
RTCBQ9Y3I0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.83■■□□□ 1.24
RTCBQ9Y3I0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.83■■□□□ 1.24
RTCBQ9Y3I0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
RTCBQ9Y3I0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RTCBQ9Y3I0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RTCBQ9Y3I0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 AC007967.3-201ENST00000434308 558 ntBASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 AC006557.2-201ENST00000592985 1240 ntBASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms