Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 AL355802.2-201ENST00000402069 882 ntBASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 TSPY6P-201ENST00000448518 926 ntBASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 AC105036.2-201ENST00000569468 176 ntBASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 AC112777.1-201ENST00000540175 1423 ntBASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 CROCCP1-201ENST00000426910 5675 ntBASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LRCH1Q9Y2L9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.29■□□□□ 0.36
LRCH1Q9Y2L9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms