Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 RCN1P2-201ENST00000398357 915 ntBASIC24.76■■□□□ 1.55
NINLQ9Y2I6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 DUTP2-201ENST00000519164 463 ntBASIC24.76■■□□□ 1.55
NINLQ9Y2I6 AF238378.1-201ENST00000526806 358 ntBASIC24.76■■□□□ 1.55
NINLQ9Y2I6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 AL662844.1-201ENST00000546340 181 ntBASIC24.76■■□□□ 1.55
NINLQ9Y2I6 TP73-AS1-207ENST00000624167 988 ntBASIC24.76■■□□□ 1.55
NINLQ9Y2I6 PHGDH-209ENST00000641074 1780 ntBASIC24.76■■□□□ 1.55
NINLQ9Y2I6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
NINLQ9Y2I6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 MIR1233-2-201ENST00000408138 82 ntBASIC24.75■■□□□ 1.55
NINLQ9Y2I6 MIR1233-1-201ENST00000408722 82 ntBASIC24.75■■□□□ 1.55
NINLQ9Y2I6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 AC120114.3-201ENST00000611923 658 ntBASIC24.75■■□□□ 1.55
NINLQ9Y2I6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC24.75■■□□□ 1.55
NINLQ9Y2I6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC24.75■■□□□ 1.55
NINLQ9Y2I6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
NINLQ9Y2I6 AC022898.2-201ENST00000616822 1312 ntBASIC24.73■■□□□ 1.55
NINLQ9Y2I6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 AC093503.3-201ENST00000624917 2352 ntBASIC24.73■■□□□ 1.55
NINLQ9Y2I6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC24.73■■□□□ 1.55
NINLQ9Y2I6 AC097374.2-201ENST00000618617 1306 ntBASIC24.73■■□□□ 1.55
NINLQ9Y2I6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NINLQ9Y2I6 AC096633.1-201ENST00000422446 749 ntBASIC24.71■■□□□ 1.55
NINLQ9Y2I6 AC079776.4-201ENST00000511039 504 ntBASIC24.71■■□□□ 1.55
NINLQ9Y2I6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC24.71■■□□□ 1.55
NINLQ9Y2I6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
NINLQ9Y2I6 AC008608.2-201ENST00000606089 416 ntBASIC24.71■■□□□ 1.55
NINLQ9Y2I6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC24.71■■□□□ 1.55
NINLQ9Y2I6 BX640515.1-201ENST00000617215 977 ntBASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms