Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.86■□□□□ 0.93
SYNPO2Q9UMS6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 FGFR3P6-201ENST00000457012 610 ntBASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 AC122714.2-201ENST00000502787 707 ntBASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 TP73-AS1-207ENST00000624167 988 ntBASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 AC093677.2-201ENST00000600169 1863 ntBASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPO2Q9UMS6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 AC007967.3-201ENST00000434308 558 ntBASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 AP001269.4-201ENST00000609611 512 ntBASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 AP005117.1-201ENST00000584346 1413 ntBASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPO2Q9UMS6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 WIZP1-201ENST00000531444 2299 ntBASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 MRPL3P1-201ENST00000400109 1033 ntBASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 KRT18P67-201ENST00000432816 1264 ntBASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
SYNPO2Q9UMS6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.83■□□□□ 0.92
SYNPO2Q9UMS6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNPO2Q9UMS6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNPO2Q9UMS6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SYNPO2Q9UMS6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNPO2Q9UMS6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SYNPO2Q9UMS6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms