Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 KRT18P23-201ENST00000435622 1283 ntBASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 REXO1L9P-201ENST00000604264 2108 ntBASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 AC009102.3-201ENST00000623118 1491 ntBASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNIP1Q9NZI2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 AL163051.1-201ENST00000569214 1512 ntBASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 MIR149-201ENST00000384879 89 ntBASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 BX088651.1-201ENST00000540551 451 ntBASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 C2orf69P3-201ENST00000565542 1120 ntBASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 AL353719.1-201ENST00000566847 864 ntBASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 Z99916.2-201ENST00000604037 246 ntBASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 AP006294.2-201ENST00000641667 209 ntBASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 AC116562.4-202ENST00000641738 218 ntBASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KCNIP1Q9NZI2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 AC068880.1-201ENST00000507289 2297 ntBASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 HOXB1-202ENST00000577092 1414 ntBASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 SLC25A6P5-201ENST00000435663 894 ntBASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 AC008550.1-201ENST00000511500 884 ntBASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 AP003041.3-201ENST00000527151 707 ntBASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms