Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.18■□□□□ 0.5
TM9SF3Q9HD45 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF3Q9HD45 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF3Q9HD45 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 NUS1P2-201ENST00000417358 873 ntBASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF3Q9HD45 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 SAPCD2P3-201ENST00000455031 850 ntBASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 MINOS1P3-201ENST00000457048 203 ntBASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 AC011840.4-201ENST00000578471 627 ntBASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF3Q9HD45 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 AL161938.1-201ENST00000569833 2180 ntBASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF3Q9HD45 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms