Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 AC134043.2-201ENST00000624206 2238 ntBASIC17.4■□□□□ 0.38
BRF2Q9HAW0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
BRF2Q9HAW0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
BRF2Q9HAW0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BRF2Q9HAW0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
BRF2Q9HAW0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
BRF2Q9HAW0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.39■□□□□ 0.37
BRF2Q9HAW0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.39■□□□□ 0.37
BRF2Q9HAW0 AL157888.1-201ENST00000631930 593 ntBASIC17.39■□□□□ 0.37
BRF2Q9HAW0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 AL031432.5-201ENST00000641059 760 ntBASIC17.39■□□□□ 0.37
BRF2Q9HAW0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 LETM1P2-201ENST00000597330 2178 ntBASIC17.39■□□□□ 0.37
BRF2Q9HAW0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BRF2Q9HAW0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 GCSHP2-201ENST00000560971 527 ntBASIC17.38■□□□□ 0.37
BRF2Q9HAW0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 PCDHB18P-201ENST00000524813 2368 ntBASIC17.38■□□□□ 0.37
BRF2Q9HAW0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms