Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 SLC25A3P1-201ENST00000443844 931 ntBASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 AL138966.2-201ENST00000621997 464 ntBASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC40Q9H9A6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 AC008687.5-201ENST00000593746 558 ntBASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC40Q9H9A6 GNAS-203ENST00000306120 1878 ntBASIC18.46■□□□□ 0.54
LRRC40Q9H9A6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 AC073912.3-201ENST00000624414 853 ntBASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC40Q9H9A6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms