Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 AL162741.1-201ENST00000565563 1558 ntBASIC19.4■□□□□ 0.7
SYNCQ9H7C4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 AC034232.1-201ENST00000506026 1064 ntBASIC19.4■□□□□ 0.7
SYNCQ9H7C4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 GCSHP2-201ENST00000560971 527 ntBASIC19.4■□□□□ 0.7
SYNCQ9H7C4 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 BICD1-207ENST00000551848 1962 ntBASIC19.4■□□□□ 0.7
SYNCQ9H7C4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNCQ9H7C4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SYNCQ9H7C4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SYNCQ9H7C4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 AC135776.1-201ENST00000319817 2481 ntBASIC19.39■□□□□ 0.69
SYNCQ9H7C4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 AC139887.4-201ENST00000607877 719 ntBASIC19.39■□□□□ 0.69
SYNCQ9H7C4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 ESPNP-201ENST00000270691 2015 ntBASIC19.39■□□□□ 0.69
SYNCQ9H7C4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNCQ9H7C4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 MIR3917-201ENST00000580971 93 ntBASIC19.38■□□□□ 0.69
SYNCQ9H7C4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SYNCQ9H7C4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 AC005332.8-201ENST00000622750 2735 ntBASIC19.37■□□□□ 0.69
SYNCQ9H7C4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.37■□□□□ 0.69
SYNCQ9H7C4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SYNCQ9H7C4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms