Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 AL662844.1-201ENST00000546340 181 ntBASIC21.16■□□□□ 0.98
SH2D4AQ9H788 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.15■□□□□ 0.98
SH2D4AQ9H788 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 KRT18P65-201ENST00000439811 1286 ntBASIC21.15■□□□□ 0.98
SH2D4AQ9H788 AC009078.2-202ENST00000463353 338 ntBASIC21.15■□□□□ 0.98
SH2D4AQ9H788 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 AP002469.2-201ENST00000531724 424 ntBASIC21.15■□□□□ 0.98
SH2D4AQ9H788 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 AL591684.3-201ENST00000605187 298 ntBASIC21.15■□□□□ 0.98
SH2D4AQ9H788 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D4AQ9H788 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
SH2D4AQ9H788 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SH2D4AQ9H788 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SH2D4AQ9H788 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SH2D4AQ9H788 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.14■□□□□ 0.98
SH2D4AQ9H788 LINC00602-201ENST00000629776 2065 ntBASIC21.14■□□□□ 0.98
SH2D4AQ9H788 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SH2D4AQ9H788 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SH2D4AQ9H788 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 AC093503.3-201ENST00000624917 2352 ntBASIC21.14■□□□□ 0.97
SH2D4AQ9H788 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 AKR1C7P-201ENST00000305623 895 ntBASIC21.14■□□□□ 0.97
SH2D4AQ9H788 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 MIR5100-201ENST00000579544 119 ntBASIC21.14■□□□□ 0.97
SH2D4AQ9H788 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 LINC01126-201ENST00000623515 1646 ntBASIC21.14■□□□□ 0.97
SH2D4AQ9H788 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SH2D4AQ9H788 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 MTCL1P1-201ENST00000446207 792 ntBASIC21.13■□□□□ 0.97
SH2D4AQ9H788 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 AC106795.1-205ENST00000512851 1056 ntBASIC21.13■□□□□ 0.97
SH2D4AQ9H788 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.13■□□□□ 0.97
SH2D4AQ9H788 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms