Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 GPR32P1-201ENST00000601788 811 ntBASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 AL121772.3-201ENST00000610840 674 ntBASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPAP1Q9BWH6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 AP003733.1-201ENST00000491725 852 ntBASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 PNN-202ENST00000553331 656 ntTSL 3 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 AC005332.3-201ENST00000589904 676 ntBASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.05■■□□□ 1.12
RPAP1Q9BWH6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 MIR149-201ENST00000384879 89 ntBASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 AC104692.2-201ENST00000603054 253 ntBASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 AC120498.9-201ENST00000339021 3867 ntBASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 NOC2LP2-201ENST00000407594 1944 ntBASIC22.04■■□□□ 1.12
RPAP1Q9BWH6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 EMBP1-201ENST00000458200 901 ntBASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 KRT18P31-201ENST00000506277 1292 ntBASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPAP1Q9BWH6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 IGHGP-201ENST00000390555 1178 ntBASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms