Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 FDX1P1-201ENST00000449115 551 ntBASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 FOSL1P1-201ENST00000511041 816 ntBASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 AC074051.2-201ENST00000565115 352 ntBASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 MYLKP1-201ENST00000509077 1580 ntBASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAIPQ9BWF2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.89■□□□□ 0.78
TRAIPQ9BWF2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 AL732292.2-201ENST00000609649 430 ntBASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 AC004263.2-201ENST00000617183 678 ntBASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAIPQ9BWF2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 SDHAP2-201ENST00000455183 2001 ntBASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
TRAIPQ9BWF2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 VENTXP7-201ENST00000475503 772 ntBASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 AP005901.3-202ENST00000581653 237 ntBASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRAIPQ9BWF2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAIPQ9BWF2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms