Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VGLL1Q99990 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.82□□□□□ -0.2
VGLL1Q99990 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.82□□□□□ -0.2
VGLL1Q99990 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.82□□□□□ -0.2
VGLL1Q99990 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.82□□□□□ -0.2
VGLL1Q99990 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.82□□□□□ -0.2
VGLL1Q99990 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VGLL1Q99990 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.82□□□□□ -0.2
VGLL1Q99990 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VGLL1Q99990 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.81□□□□□ -0.2
VGLL1Q99990 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.81□□□□□ -0.2
VGLL1Q99990 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
VGLL1Q99990 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.81□□□□□ -0.2
VGLL1Q99990 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.81□□□□□ -0.2
VGLL1Q99990 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.81□□□□□ -0.2
VGLL1Q99990 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.81□□□□□ -0.2
VGLL1Q99990 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 MCCD1P1-208ENST00000445732 328 ntBASIC13.81□□□□□ -0.2
VGLL1Q99990 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.81□□□□□ -0.2
VGLL1Q99990 CD99P1-205ENST00000527459 561 ntBASIC13.81□□□□□ -0.2
VGLL1Q99990 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.81□□□□□ -0.2
VGLL1Q99990 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.81□□□□□ -0.2
VGLL1Q99990 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.81□□□□□ -0.2
VGLL1Q99990 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 GPAT2P1-201ENST00000444924 1672 ntBASIC13.81□□□□□ -0.2
VGLL1Q99990 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VGLL1Q99990 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.81□□□□□ -0.2
VGLL1Q99990 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VGLL1Q99990 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VGLL1Q99990 PHGDH-209ENST00000641074 1780 ntBASIC13.81□□□□□ -0.2
VGLL1Q99990 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
VGLL1Q99990 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.8□□□□□ -0.2
VGLL1Q99990 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.8□□□□□ -0.2
VGLL1Q99990 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
VGLL1Q99990 AC141586.5-201ENST00000624546 2050 ntBASIC13.8□□□□□ -0.2
VGLL1Q99990 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.8□□□□□ -0.2
VGLL1Q99990 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.8□□□□□ -0.2
VGLL1Q99990 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.8□□□□□ -0.2
VGLL1Q99990 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.8□□□□□ -0.2
VGLL1Q99990 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.8□□□□□ -0.2
VGLL1Q99990 RPPH1-201ENST00000516869 333 ntBASIC13.8□□□□□ -0.2
VGLL1Q99990 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.8□□□□□ -0.2
VGLL1Q99990 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.8□□□□□ -0.2
VGLL1Q99990 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
VGLL1Q99990 AP000692.2-201ENST00000608391 879 ntBASIC13.8□□□□□ -0.2
VGLL1Q99990 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.8□□□□□ -0.2
VGLL1Q99990 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.8□□□□□ -0.2
VGLL1Q99990 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 KRT8P50-201ENST00000562022 1438 ntBASIC13.8□□□□□ -0.2
VGLL1Q99990 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VGLL1Q99990 FSCN1P1-201ENST00000568912 1481 ntBASIC13.8□□□□□ -0.2
VGLL1Q99990 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms