Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.07■□□□□ 0.16
VRK1Q99986 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
VRK1Q99986 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.07■□□□□ 0.16
VRK1Q99986 AC093525.10-201ENST00000625130 1569 ntBASIC16.07■□□□□ 0.16
VRK1Q99986 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
VRK1Q99986 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 AL031598.1-201ENST00000561511 1773 ntBASIC16.07■□□□□ 0.16
VRK1Q99986 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
VRK1Q99986 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.07■□□□□ 0.16
VRK1Q99986 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.07■□□□□ 0.16
VRK1Q99986 PRORSD1P-202ENST00000563365 2154 ntBASIC16.07■□□□□ 0.16
VRK1Q99986 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK1Q99986 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VRK1Q99986 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
VRK1Q99986 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.06■□□□□ 0.16
VRK1Q99986 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VRK1Q99986 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.06■□□□□ 0.16
VRK1Q99986 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.06■□□□□ 0.16
VRK1Q99986 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.06■□□□□ 0.16
VRK1Q99986 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.06■□□□□ 0.16
VRK1Q99986 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK1Q99986 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK1Q99986 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
VRK1Q99986 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
VRK1Q99986 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.05■□□□□ 0.16
VRK1Q99986 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.05■□□□□ 0.16
VRK1Q99986 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.05■□□□□ 0.16
VRK1Q99986 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VRK1Q99986 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.05■□□□□ 0.16
VRK1Q99986 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.05■□□□□ 0.16
VRK1Q99986 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.05■□□□□ 0.16
VRK1Q99986 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
VRK1Q99986 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.05■□□□□ 0.16
VRK1Q99986 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.05■□□□□ 0.16
VRK1Q99986 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.05■□□□□ 0.16
VRK1Q99986 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.05■□□□□ 0.16
VRK1Q99986 MIR4674-201ENST00000582457 87 ntBASIC16.05■□□□□ 0.16
VRK1Q99986 AC008622.2-201ENST00000617006 1229 ntBASIC16.05■□□□□ 0.16
VRK1Q99986 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
VRK1Q99986 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VRK1Q99986 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
VRK1Q99986 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
VRK1Q99986 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK1Q99986 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
VRK1Q99986 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK1Q99986 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.04■□□□□ 0.16
VRK1Q99986 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms