Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC005336.2-201ENST00000593183 939 ntBASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 AC008608.2-201ENST00000606089 416 ntBASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNGAP1Q96PV0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 AC132008.2-207ENST00000454517 770 ntBASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 AC117500.6-201ENST00000624871 588 ntBASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 AF228730.7-201ENST00000641842 219 ntBASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNGAP1Q96PV0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 AC068472.1-201ENST00000474589 881 ntBASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 AL499627.1-201ENST00000569373 2188 ntBASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNGAP1Q96PV0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 AC112777.1-201ENST00000540175 1423 ntBASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 MIR574-201ENST00000385209 96 ntBASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 RCN1P2-201ENST00000398357 915 ntBASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 AC018712.1-201ENST00000455767 687 ntBASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 AL355877.3-201ENST00000622820 899 ntBASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 AIRN-201ENST00000601203 4374 ntBASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms