Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ZNF259P1-201ENST00000407656 1365 ntBASIC19.33■□□□□ 0.69
CASD1Q96PB1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASD1Q96PB1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASD1Q96PB1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASD1Q96PB1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.33■□□□□ 0.68
CASD1Q96PB1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.33■□□□□ 0.68
CASD1Q96PB1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.33■□□□□ 0.68
CASD1Q96PB1 MIR940-201ENST00000401276 94 ntBASIC19.33■□□□□ 0.68
CASD1Q96PB1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CASD1Q96PB1 AC012640.2-201ENST00000561606 901 ntBASIC19.33■□□□□ 0.68
CASD1Q96PB1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.33■□□□□ 0.68
CASD1Q96PB1 AC025062.2-201ENST00000605477 670 ntBASIC19.33■□□□□ 0.68
CASD1Q96PB1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASD1Q96PB1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASD1Q96PB1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASD1Q96PB1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASD1Q96PB1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASD1Q96PB1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASD1Q96PB1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CASD1Q96PB1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASD1Q96PB1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASD1Q96PB1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 PMS2P7-201ENST00000506558 1336 ntBASIC19.32■□□□□ 0.68
CASD1Q96PB1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.32■□□□□ 0.68
CASD1Q96PB1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CASD1Q96PB1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CASD1Q96PB1 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.32■□□□□ 0.68
CASD1Q96PB1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.32■□□□□ 0.68
CASD1Q96PB1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.32■□□□□ 0.68
CASD1Q96PB1 TERC-201ENST00000602385 541 ntBASIC19.32■□□□□ 0.68
CASD1Q96PB1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.32■□□□□ 0.68
CASD1Q96PB1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.32■□□□□ 0.68
CASD1Q96PB1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CASD1Q96PB1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASD1Q96PB1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASD1Q96PB1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 AC097374.2-201ENST00000618617 1306 ntBASIC19.31■□□□□ 0.68
CASD1Q96PB1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASD1Q96PB1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASD1Q96PB1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 AC007967.3-201ENST00000434308 558 ntBASIC19.31■□□□□ 0.68
CASD1Q96PB1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASD1Q96PB1 OR7E14P-202ENST00000530490 1290 ntBASIC19.31■□□□□ 0.68
CASD1Q96PB1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASD1Q96PB1 AC145285.3-201ENST00000564603 959 ntBASIC19.31■□□□□ 0.68
CASD1Q96PB1 NKAPP1-205ENST00000585790 367 ntBASIC19.31■□□□□ 0.68
CASD1Q96PB1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASD1Q96PB1 AL139288.1-201ENST00000623748 933 ntBASIC19.31■□□□□ 0.68
CASD1Q96PB1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 AP000867.4-201ENST00000641616 219 ntBASIC19.31■□□□□ 0.68
CASD1Q96PB1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASD1Q96PB1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASD1Q96PB1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASD1Q96PB1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASD1Q96PB1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.31■□□□□ 0.68
CASD1Q96PB1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 FAM220CP-201ENST00000395253 831 ntBASIC19.3■□□□□ 0.68
CASD1Q96PB1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASD1Q96PB1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CASD1Q96PB1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms