Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 UNC93B4-201ENST00000505679 747 ntBASIC15.65■□□□□ 0.1
CMTM3Q96MX0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CMTM3Q96MX0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CMTM3Q96MX0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
CMTM3Q96MX0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.64■□□□□ 0.09
CMTM3Q96MX0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.63■□□□□ 0.09
CMTM3Q96MX0 AL137784.2-201ENST00000607332 1000 ntBASIC15.63■□□□□ 0.09
CMTM3Q96MX0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms