Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 AC020916.1-201ENST00000587762 1774 ntBASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 STARP1-201ENST00000397973 869 ntBASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 AC024563.2-201ENST00000603282 481 ntBASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 AC011558.1-201ENST00000623459 338 ntBASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM5Q96HC4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 AC079602.3-201ENST00000623931 403 ntBASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 AL391807.1-203ENST00000604392 2365 ntBASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM5Q96HC4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 AC022898.2-201ENST00000616822 1312 ntBASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 HLA-F-220ENST00000434407 884 ntBASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 YBX1P2-201ENST00000489612 999 ntBASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms