Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCMH1Q96GD3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
SCMH1Q96GD3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCMH1Q96GD3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SCMH1Q96GD3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 AP000593.1-201ENST00000393668 712 ntBASIC16.83■□□□□ 0.28
SCMH1Q96GD3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 AC024563.2-201ENST00000603282 481 ntBASIC16.83■□□□□ 0.28
SCMH1Q96GD3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCMH1Q96GD3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 NUS1P1-201ENST00000446295 882 ntBASIC16.82■□□□□ 0.28
SCMH1Q96GD3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 AC090616.6-201ENST00000582640 721 ntBASIC16.82■□□□□ 0.28
SCMH1Q96GD3 GPR32P1-201ENST00000601788 811 ntBASIC16.82■□□□□ 0.28
SCMH1Q96GD3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 AC083906.6-201ENST00000641366 219 ntBASIC16.82■□□□□ 0.28
SCMH1Q96GD3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCMH1Q96GD3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 IGHGP-201ENST00000390555 1178 ntBASIC16.81■□□□□ 0.28
SCMH1Q96GD3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCMH1Q96GD3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms