Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 ECEL1P3-201ENST00000427961 737 ntBASIC19.25■□□□□ 0.67
TRIM11Q96F44 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 MIR3917-201ENST00000580971 93 ntBASIC19.25■□□□□ 0.67
TRIM11Q96F44 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 AP000997.3-201ENST00000623333 2250 ntBASIC19.25■□□□□ 0.67
TRIM11Q96F44 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM11Q96F44 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM11Q96F44 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRIM11Q96F44 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRIM11Q96F44 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM11Q96F44 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM11Q96F44 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 AC093827.2-201ENST00000512654 315 ntBASIC19.24■□□□□ 0.67
TRIM11Q96F44 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRIM11Q96F44 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
TRIM11Q96F44 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 KRT18P55-202ENST00000578578 1546 ntBASIC19.24■□□□□ 0.67
TRIM11Q96F44 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM11Q96F44 PCDHB18P-201ENST00000524813 2368 ntBASIC19.24■□□□□ 0.67
TRIM11Q96F44 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.23■□□□□ 0.67
TRIM11Q96F44 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 AC134043.2-201ENST00000624206 2238 ntBASIC19.23■□□□□ 0.67
TRIM11Q96F44 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM11Q96F44 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRIM11Q96F44 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM11Q96F44 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 AC026471.1-201ENST00000564629 3026 ntBASIC19.22■□□□□ 0.67
TRIM11Q96F44 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM11Q96F44 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM11Q96F44 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM11Q96F44 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 AC067852.2-201ENST00000590513 2313 ntBASIC19.22■□□□□ 0.67
TRIM11Q96F44 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM11Q96F44 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM11Q96F44 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM11Q96F44 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 AL596275.1-201ENST00000423464 877 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms