Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 AP003733.1-201ENST00000491725 852 ntBASIC19.25■□□□□ 0.67
UBA3Q8TBC4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 AL136038.3-201ENST00000561909 1096 ntBASIC19.25■□□□□ 0.67
UBA3Q8TBC4 AL121956.5-201ENST00000625261 221 ntBASIC19.25■□□□□ 0.67
UBA3Q8TBC4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 ABALON-201ENST00000629058 1903 ntBASIC19.25■□□□□ 0.67
UBA3Q8TBC4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBA3Q8TBC4 AC005332.1-201ENST00000577698 1310 ntBASIC19.25■□□□□ 0.67
UBA3Q8TBC4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 AL645929.1-201ENST00000420084 975 ntBASIC19.24■□□□□ 0.67
UBA3Q8TBC4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBA3Q8TBC4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 LINC00602-201ENST00000629776 2065 ntBASIC19.23■□□□□ 0.67
UBA3Q8TBC4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 AC004263.2-201ENST00000617183 678 ntBASIC19.23■□□□□ 0.67
UBA3Q8TBC4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.23■□□□□ 0.67
UBA3Q8TBC4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 AL390961.4-201ENST00000623958 2535 ntBASIC19.22■□□□□ 0.67
UBA3Q8TBC4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms