Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 AL445228.2-201ENST00000605589 952 ntBASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 AC093677.2-201ENST00000600169 1863 ntBASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 AC099398.1-201ENST00000567919 2776 ntBASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SIMC1Q8NDZ2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
SIMC1Q8NDZ2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 AC009102.3-201ENST00000623118 1491 ntBASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 BX664615.1-201ENST00000443558 458 ntBASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 MIR3917-201ENST00000580971 93 ntBASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 AC092865.7-201ENST00000641832 219 ntBASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 LINC01126-201ENST00000623515 1646 ntBASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIMC1Q8NDZ2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 SPDYE15P-201ENST00000424157 909 ntBASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 TMPOP1-202ENST00000424642 1267 ntBASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 AC140113.3-201ENST00000605663 199 ntBASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms