Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NANOGP1Q8N7R0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NANOGP1Q8N7R0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NANOGP1Q8N7R0 CROCCP2-202ENST00000412962 2773 ntBASIC16.23■□□□□ 0.19
NANOGP1Q8N7R0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.23■□□□□ 0.19
NANOGP1Q8N7R0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.23■□□□□ 0.19
NANOGP1Q8N7R0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NANOGP1Q8N7R0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NANOGP1Q8N7R0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 AC099343.3-201ENST00000605834 2503 ntBASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 AC133963.1-201ENST00000504166 1679 ntBASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 AC006970.2-201ENST00000450065 779 ntBASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 KRT16P5-201ENST00000455284 522 ntBASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 AC008622.2-201ENST00000617006 1229 ntBASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.22■□□□□ 0.19
NANOGP1Q8N7R0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 AC004951.3-201ENST00000418645 1148 ntBASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 MTDHP1-201ENST00000605323 784 ntBASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 AC009102.3-201ENST00000623118 1491 ntBASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NANOGP1Q8N7R0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.21■□□□□ 0.18
NANOGP1Q8N7R0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NANOGP1Q8N7R0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
NANOGP1Q8N7R0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NANOGP1Q8N7R0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 AL163051.1-201ENST00000569214 1512 ntBASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NANOGP1Q8N7R0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms