Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC9CQ8N5M4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 NOC2LP1-202ENST00000452600 2235 ntBASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 AC140113.3-201ENST00000605663 199 ntBASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 PHGDH-209ENST00000641074 1780 ntBASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC9CQ8N5M4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AC113347.1-201ENST00000413321 391 ntBASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AL137013.1-201ENST00000432946 1228 ntBASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AC034232.1-201ENST00000506026 1064 ntBASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AC010203.1-204ENST00000548782 407 ntBASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AC008687.5-201ENST00000593746 558 ntBASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 AL096828.2-201ENST00000567259 1965 ntBASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.38□□□□□ -0.11
TTC9CQ8N5M4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC9CQ8N5M4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC9CQ8N5M4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC9CQ8N5M4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TTC9CQ8N5M4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC9CQ8N5M4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC9CQ8N5M4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TTC9CQ8N5M4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms