Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 AC134684.3-201ENST00000641758 218 ntBASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 AC097374.2-201ENST00000618617 1306 ntBASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 BX005266.1-201ENST00000473402 457 ntBASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 AC027796.2-201ENST00000575326 344 ntBASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 MIR1199-201ENST00000621445 119 ntBASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 AL022326.1-202ENST00000641533 845 ntBASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNKSR3Q6P9H4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 MTDHP5-201ENST00000598980 586 ntBASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 PGM5P2-202ENST00000637225 1043 ntBASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 AL499627.1-201ENST00000569373 2188 ntBASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.48■□□□□ 0.71
CNKSR3Q6P9H4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 AC006557.2-201ENST00000592985 1240 ntBASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms