Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCRAQ6ISU1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.66■□□□□ 0.58
PTCRAQ6ISU1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCRAQ6ISU1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTCRAQ6ISU1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.66■□□□□ 0.58
PTCRAQ6ISU1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCRAQ6ISU1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 KRT18P65-201ENST00000439811 1286 ntBASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 HCG4B-203ENST00000450128 991 ntBASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 PRYP5-201ENST00000451909 266 ntBASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 AP000344.2-201ENST00000512987 629 ntBASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 AC073592.4-201ENST00000623827 446 ntBASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCRAQ6ISU1 MTMR9LP-203ENST00000426597 1545 ntBASIC18.64■□□□□ 0.58
PTCRAQ6ISU1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.64■□□□□ 0.58
PTCRAQ6ISU1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PTCRAQ6ISU1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 AC005034.1-201ENST00000426657 489 ntBASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 AL035252.4-201ENST00000624174 288 ntBASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 PMPCAP1-201ENST00000508114 1576 ntBASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PTCRAQ6ISU1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 AC108073.2-201ENST00000464002 357 ntBASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 AC112698.1-201ENST00000510299 916 ntBASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 AC092667.1-201ENST00000434301 2586 ntBASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCRAQ6ISU1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms