Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRK2Q5S007 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRK2Q5S007 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRK2Q5S007 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRK2Q5S007 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRK2Q5S007 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRK2Q5S007 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRK2Q5S007 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 CRYGEP-201ENST00000412192 528 ntBASIC15.68■□□□□ 0.1
LRRK2Q5S007 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 DUX4L27-201ENST00000554796 1261 ntBASIC15.68■□□□□ 0.1
LRRK2Q5S007 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 AC093520.2-201ENST00000561830 333 ntBASIC15.68■□□□□ 0.1
LRRK2Q5S007 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRK2Q5S007 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRK2Q5S007 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRK2Q5S007 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 ELK2BP-201ENST00000415014 1224 ntBASIC15.67■□□□□ 0.1
LRRK2Q5S007 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRK2Q5S007 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRK2Q5S007 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRK2Q5S007 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRK2Q5S007 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRK2Q5S007 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRK2Q5S007 ADH5P3-201ENST00000433842 1137 ntBASIC15.67■□□□□ 0.1
LRRK2Q5S007 MTCL1P1-201ENST00000446207 792 ntBASIC15.67■□□□□ 0.1
LRRK2Q5S007 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRK2Q5S007 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRK2Q5S007 AL606495.2-201ENST00000605867 535 ntBASIC15.67■□□□□ 0.1
LRRK2Q5S007 AC091812.2-201ENST00000619081 385 ntBASIC15.67■□□□□ 0.1
LRRK2Q5S007 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRK2Q5S007 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 AC022494.1-201ENST00000466044 728 ntBASIC15.66■□□□□ 0.1
LRRK2Q5S007 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 AL627223.1-201ENST00000416693 442 ntBASIC15.66■□□□□ 0.1
LRRK2Q5S007 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 CNN2P2-201ENST00000443536 909 ntBASIC15.66■□□□□ 0.1
LRRK2Q5S007 CNN2P3-201ENST00000450201 906 ntBASIC15.66■□□□□ 0.1
LRRK2Q5S007 UGT1A2P-201ENST00000454886 866 ntBASIC15.66■□□□□ 0.1
LRRK2Q5S007 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 AL136317.3-201ENST00000618497 906 ntBASIC15.66■□□□□ 0.1
LRRK2Q5S007 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRK2Q5S007 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRK2Q5S007 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRRK2Q5S007 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRK2Q5S007 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms