Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALFQ53S48 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALFQ53S48 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALFQ53S48 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ALFQ53S48 AL353692.3-201ENST00000407031 1396 ntBASIC18.68■□□□□ 0.58
ALFQ53S48 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
ALFQ53S48 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALFQ53S48 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.68■□□□□ 0.58
ALFQ53S48 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.68■□□□□ 0.58
ALFQ53S48 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.68■□□□□ 0.58
ALFQ53S48 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
ALFQ53S48 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.68■□□□□ 0.58
ALFQ53S48 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.68■□□□□ 0.58
ALFQ53S48 AC069148.1-201ENST00000608741 768 ntBASIC18.68■□□□□ 0.58
ALFQ53S48 AC093458.2-201ENST00000623150 629 ntBASIC18.68■□□□□ 0.58
ALFQ53S48 LINC00602-201ENST00000629776 2065 ntBASIC18.68■□□□□ 0.58
ALFQ53S48 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALFQ53S48 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALFQ53S48 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
ALFQ53S48 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALFQ53S48 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ALFQ53S48 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ALFQ53S48 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.67■□□□□ 0.58
ALFQ53S48 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 BX276092.5-203ENST00000456199 560 ntBASIC18.67■□□□□ 0.58
ALFQ53S48 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.67■□□□□ 0.58
ALFQ53S48 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
ALFQ53S48 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.67■□□□□ 0.58
ALFQ53S48 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.67■□□□□ 0.58
ALFQ53S48 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 AC008687.5-201ENST00000593746 558 ntBASIC18.67■□□□□ 0.58
ALFQ53S48 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.67■□□□□ 0.58
ALFQ53S48 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ALFQ53S48 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ALFQ53S48 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALFQ53S48 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 LINC00167-201ENST00000530583 1419 ntBASIC18.66■□□□□ 0.58
ALFQ53S48 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.66■□□□□ 0.58
ALFQ53S48 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.66■□□□□ 0.58
ALFQ53S48 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ALFQ53S48 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.66■□□□□ 0.58
ALFQ53S48 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.66■□□□□ 0.58
ALFQ53S48 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.66■□□□□ 0.58
ALFQ53S48 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.66■□□□□ 0.58
ALFQ53S48 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.66■□□□□ 0.58
ALFQ53S48 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.66■□□□□ 0.58
ALFQ53S48 AL121672.3-201ENST00000608644 468 ntBASIC18.66■□□□□ 0.58
ALFQ53S48 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ALFQ53S48 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.66■□□□□ 0.58
ALFQ53S48 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.66■□□□□ 0.58
ALFQ53S48 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.66■□□□□ 0.58
ALFQ53S48 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
ALFQ53S48 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.66■□□□□ 0.58
ALFQ53S48 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.66■□□□□ 0.58
ALFQ53S48 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.66■□□□□ 0.58
ALFQ53S48 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ALFQ53S48 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALFQ53S48 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.66■□□□□ 0.58
ALFQ53S48 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ALFQ53S48 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms