Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 AC132008.2-207ENST00000454517 770 ntBASIC21.72■■□□□ 1.07
PDS5AQ29RF7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 AL355877.3-201ENST00000622820 899 ntBASIC21.72■■□□□ 1.07
PDS5AQ29RF7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDS5AQ29RF7 AC098818.2-201ENST00000564925 2320 ntBASIC21.7■■□□□ 1.07
PDS5AQ29RF7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 KRT8P47-201ENST00000604727 1398 ntBASIC21.7■■□□□ 1.06
PDS5AQ29RF7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 MRPL3P1-201ENST00000400109 1033 ntBASIC21.7■■□□□ 1.06
PDS5AQ29RF7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 AC008608.2-201ENST00000606089 416 ntBASIC21.7■■□□□ 1.06
PDS5AQ29RF7 AP001269.4-201ENST00000609611 512 ntBASIC21.7■■□□□ 1.06
PDS5AQ29RF7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.7■■□□□ 1.06
PDS5AQ29RF7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 WIZP1-201ENST00000531444 2299 ntBASIC21.69■■□□□ 1.06
PDS5AQ29RF7 TNXA-203ENST00000507684 2038 ntBASIC21.69■■□□□ 1.06
PDS5AQ29RF7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 FGFR3P6-201ENST00000457012 610 ntBASIC21.69■■□□□ 1.06
PDS5AQ29RF7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDS5AQ29RF7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms