Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC31.8■■■□□ 2.68
HMGXB3Q12766 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC31.8■■■□□ 2.68
HMGXB3Q12766 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
HMGXB3Q12766 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
HMGXB3Q12766 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 PAWRP1-201ENST00000451083 565 ntBASIC31.79■■■□□ 2.68
HMGXB3Q12766 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 CD63-210ENST00000550776 870 ntTSL 5 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
HMGXB3Q12766 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
HMGXB3Q12766 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
HMGXB3Q12766 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
HMGXB3Q12766 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC31.79■■■□□ 2.68
HMGXB3Q12766 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
HMGXB3Q12766 PC-214ENST00000628663 1470 ntTSL 5 BASIC31.78■■■□□ 2.68
HMGXB3Q12766 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
HMGXB3Q12766 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
HMGXB3Q12766 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC31.78■■■□□ 2.68
HMGXB3Q12766 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
HMGXB3Q12766 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC31.78■■■□□ 2.68
HMGXB3Q12766 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
HMGXB3Q12766 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC31.78■■■□□ 2.68
HMGXB3Q12766 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
HMGXB3Q12766 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
HMGXB3Q12766 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC31.78■■■□□ 2.68
HMGXB3Q12766 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
HMGXB3Q12766 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
HMGXB3Q12766 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
HMGXB3Q12766 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
HMGXB3Q12766 SNCG-201ENST00000348795 684 ntTSL 2 BASIC31.77■■■□□ 2.68
HMGXB3Q12766 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
HMGXB3Q12766 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
HMGXB3Q12766 RHOQP3-201ENST00000437982 621 ntBASIC31.77■■■□□ 2.68
HMGXB3Q12766 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
HMGXB3Q12766 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
HMGXB3Q12766 POLI-202ENST00000406285 2030 ntTSL 2 BASIC31.77■■■□□ 2.68
HMGXB3Q12766 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC31.77■■■□□ 2.68
HMGXB3Q12766 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
HMGXB3Q12766 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.68
HMGXB3Q12766 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
HMGXB3Q12766 AC132938.6-201ENST00000623828 1655 ntBASIC31.76■■■□□ 2.68
HMGXB3Q12766 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
HMGXB3Q12766 COPE-202ENST00000349893 948 ntTSL 2 BASIC31.76■■■□□ 2.68
HMGXB3Q12766 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC31.76■■■□□ 2.68
HMGXB3Q12766 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC31.76■■■□□ 2.68
HMGXB3Q12766 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC31.76■■■□□ 2.68
HMGXB3Q12766 AC091812.2-201ENST00000619081 385 ntBASIC31.76■■■□□ 2.68
HMGXB3Q12766 AC073592.5-201ENST00000624854 528 ntBASIC31.76■■■□□ 2.68
HMGXB3Q12766 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
HMGXB3Q12766 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC31.76■■■□□ 2.67
HMGXB3Q12766 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC31.76■■■□□ 2.67
HMGXB3Q12766 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
HMGXB3Q12766 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
HMGXB3Q12766 FAM58CP-201ENST00000435741 640 ntBASIC31.75■■■□□ 2.67
HMGXB3Q12766 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC31.75■■■□□ 2.67
HMGXB3Q12766 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
HMGXB3Q12766 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
HMGXB3Q12766 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
HMGXB3Q12766 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
HMGXB3Q12766 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
HMGXB3Q12766 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
HMGXB3Q12766 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
HMGXB3Q12766 CCND1-203ENST00000536559 553 ntTSL 3 BASIC31.75■■■□□ 2.67
HMGXB3Q12766 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC31.75■■■□□ 2.67
HMGXB3Q12766 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
HMGXB3Q12766 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
HMGXB3Q12766 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
HMGXB3Q12766 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
HMGXB3Q12766 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC31.74■■■□□ 2.67
HMGXB3Q12766 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC31.74■■■□□ 2.67
HMGXB3Q12766 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
HMGXB3Q12766 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC31.74■■■□□ 2.67
HMGXB3Q12766 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC31.74■■■□□ 2.67
HMGXB3Q12766 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
HMGXB3Q12766 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC31.74■■■□□ 2.67
HMGXB3Q12766 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC31.74■■■□□ 2.67
HMGXB3Q12766 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
HMGXB3Q12766 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC31.74■■■□□ 2.67
HMGXB3Q12766 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
HMGXB3Q12766 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
HMGXB3Q12766 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HMGXB3Q12766 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
HMGXB3Q12766 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC31.73■■■□□ 2.67
HMGXB3Q12766 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC31.73■■■□□ 2.67
HMGXB3Q12766 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HMGXB3Q12766 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
HMGXB3Q12766 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
HMGXB3Q12766 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
HMGXB3Q12766 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC31.73■■■□□ 2.67
HMGXB3Q12766 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC31.73■■■□□ 2.67
HMGXB3Q12766 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC31.73■■■□□ 2.67
HMGXB3Q12766 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
HMGXB3Q12766 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms