Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.92■□□□□ 0.62
IRX4P78413 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.92■□□□□ 0.62
IRX4P78413 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.92■□□□□ 0.62
IRX4P78413 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.92■□□□□ 0.62
IRX4P78413 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.92■□□□□ 0.62
IRX4P78413 MIR3652-201ENST00000579335 131 ntBASIC18.92■□□□□ 0.62
IRX4P78413 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.92■□□□□ 0.62
IRX4P78413 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.92■□□□□ 0.62
IRX4P78413 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.92■□□□□ 0.62
IRX4P78413 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.92■□□□□ 0.62
IRX4P78413 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
IRX4P78413 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
IRX4P78413 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
IRX4P78413 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.92■□□□□ 0.62
IRX4P78413 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX4P78413 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.91■□□□□ 0.62
IRX4P78413 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX4P78413 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX4P78413 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
IRX4P78413 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.91■□□□□ 0.62
IRX4P78413 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 SPDYE15P-201ENST00000424157 909 ntBASIC18.91■□□□□ 0.62
IRX4P78413 SPDYE13P-201ENST00000445314 798 ntBASIC18.91■□□□□ 0.62
IRX4P78413 FDX1P1-201ENST00000449115 551 ntBASIC18.91■□□□□ 0.62
IRX4P78413 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.91■□□□□ 0.62
IRX4P78413 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.91■□□□□ 0.62
IRX4P78413 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
IRX4P78413 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.91■□□□□ 0.62
IRX4P78413 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
IRX4P78413 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.91■□□□□ 0.62
IRX4P78413 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
IRX4P78413 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
IRX4P78413 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 ANO7L1-203ENST00000602586 1720 ntBASIC18.91■□□□□ 0.62
IRX4P78413 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.91■□□□□ 0.62
IRX4P78413 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX4P78413 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX4P78413 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX4P78413 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
IRX4P78413 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
IRX4P78413 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
IRX4P78413 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
IRX4P78413 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.9■□□□□ 0.62
IRX4P78413 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
IRX4P78413 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
IRX4P78413 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.9■□□□□ 0.62
IRX4P78413 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
IRX4P78413 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.9■□□□□ 0.62
IRX4P78413 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.9■□□□□ 0.62
IRX4P78413 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.9■□□□□ 0.62
IRX4P78413 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.9■□□□□ 0.62
IRX4P78413 PRELID1P1-202ENST00000567272 903 ntBASIC18.9■□□□□ 0.62
IRX4P78413 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
IRX4P78413 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.9■□□□□ 0.62
IRX4P78413 AC092329.2-201ENST00000598402 547 ntBASIC18.9■□□□□ 0.62
IRX4P78413 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
IRX4P78413 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.9■□□□□ 0.62
IRX4P78413 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms